Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 AC113404.2-201ENST00000507884 177 ntBASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 GCSHP2-201ENST00000560971 527 ntBASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHMP2BQ9UQN3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 LINC01568-207ENST00000641790 1380 ntBASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2BQ9UQN3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 AC024563.2-201ENST00000603282 481 ntBASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 LINC01451-201ENST00000623792 534 ntBASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 AC141257.4-201ENST00000634557 245 ntBASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 AC136944.6-201ENST00000634818 245 ntBASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms