Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 AL390955.1-201ENST00000428694 934 ntBASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB4Q9UN71 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB4Q9UN71 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 EGLN1P1-201ENST00000531623 762 ntBASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 AL512604.3-201ENST00000569583 964 ntBASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB4Q9UN71 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 TSPY14P-201ENST00000303979 915 ntBASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 SNORA78-201ENST00000459373 127 ntBASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB4Q9UN71 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms