Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIN7CQ9NUP9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 AK4P3-201ENST00000418260 669 ntBASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 YBX1P2-201ENST00000489612 999 ntBASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIN7CQ9NUP9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 RNF152P1-201ENST00000397754 604 ntBASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 AC117947.1-201ENST00000427448 529 ntBASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 AC034232.1-201ENST00000506026 1064 ntBASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 LINC01238-205ENST00000567549 1107 ntBASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 AC139887.4-201ENST00000607877 719 ntBASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 AL023973.1-201ENST00000624619 620 ntBASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIN7CQ9NUP9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms