Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 AC010460.3-201ENST00000511359 1579 ntBASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 AC006557.2-201ENST00000592985 1240 ntBASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 AL035633.1-201ENST00000406139 838 ntBASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 CNN2P11-201ENST00000429351 262 ntBASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 AC007967.3-201ENST00000434308 558 ntBASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 KRT18P55-202ENST00000578578 1546 ntBASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDLIM7Q9NR12 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 AC136632.2-201ENST00000512891 861 ntBASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 AP002472.1-201ENST00000577490 586 ntBASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 AC092865.6-201ENST00000642101 219 ntBASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDLIM7Q9NR12 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.73■□□□□ 0.75
PDLIM7Q9NR12 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms