Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 AC002347.1-201ENST00000569543 541 ntBASIC20.81■□□□□ 0.92
DDX4Q9NQI0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 AC008667.4-201ENST00000607370 168 ntBASIC20.81■□□□□ 0.92
DDX4Q9NQI0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 AC092865.6-201ENST00000642101 219 ntBASIC20.81■□□□□ 0.92
DDX4Q9NQI0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 AC097637.2-201ENST00000624096 1997 ntBASIC20.81■□□□□ 0.92
DDX4Q9NQI0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX4Q9NQI0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 HCG4B-203ENST00000450128 991 ntBASIC20.8■□□□□ 0.92
DDX4Q9NQI0 AC002558.1-201ENST00000488906 803 ntBASIC20.8■□□□□ 0.92
DDX4Q9NQI0 IGHV3-52-201ENST00000519770 353 ntBASIC20.8■□□□□ 0.92
DDX4Q9NQI0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX4Q9NQI0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 FLJ13224-201ENST00000313737 1514 ntBASIC20.79■□□□□ 0.92
DDX4Q9NQI0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 AC018845.2-201ENST00000568326 409 ntBASIC20.79■□□□□ 0.92
DDX4Q9NQI0 MIR4751-201ENST00000578027 74 ntBASIC20.79■□□□□ 0.92
DDX4Q9NQI0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 AL353135.1-201ENST00000606729 504 ntBASIC20.79■□□□□ 0.92
DDX4Q9NQI0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX4Q9NQI0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX4Q9NQI0 PTCHD3P3-201ENST00000403073 906 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms