Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE5Q9HCH3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPNE5Q9HCH3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE5Q9HCH3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPNE5Q9HCH3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 BCL2-203ENST00000589955 5011 ntBASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 HTR7P1-202ENST00000624664 4411 ntBASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE5Q9HCH3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 Z98044.1-201ENST00000632503 1764 ntBASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 GPX1P2-201ENST00000429271 606 ntBASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 MIR3180-4-201ENST00000582223 153 ntBASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 HCG11-201ENST00000411553 5696 ntBASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 AC034236.2-201ENST00000606662 1610 ntBASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 HEIH-201ENST00000623091 1652 ntBASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE5Q9HCH3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 RCN1P2-201ENST00000398357 915 ntBASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE5Q9HCH3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms