Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 AL390955.2-201ENST00000603032 514 ntBASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
ZFYVE28Q9HCC9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 ANO7L1-203ENST00000602586 1720 ntBASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE28Q9HCC9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 IGHV3-52-201ENST00000519770 353 ntBASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 DUX4L27-201ENST00000554796 1261 ntBASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 AC006116.8-202ENST00000587620 1550 ntBASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ZFYVE28Q9HCC9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 AL627223.1-201ENST00000416693 442 ntBASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 TIMM8BP1-201ENST00000452384 211 ntBASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 AC009093.7-201ENST00000623853 1223 ntBASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE28Q9HCC9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms