Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 AC103564.2-201ENST00000432853 1299 ntBASIC18.26■□□□□ 0.51
BRD9Q9H8M2 HMGN1P19-201ENST00000436976 333 ntBASIC18.26■□□□□ 0.51
BRD9Q9H8M2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRD9Q9H8M2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 SIGLEC16-201ENST00000599858 1437 ntBASIC18.25■□□□□ 0.51
BRD9Q9H8M2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 AC073621.1-201ENST00000392730 636 ntBASIC18.25■□□□□ 0.51
BRD9Q9H8M2 SPDYE21P-201ENST00000413323 827 ntBASIC18.25■□□□□ 0.51
BRD9Q9H8M2 AC211486.1-202ENST00000416371 468 ntBASIC18.25■□□□□ 0.51
BRD9Q9H8M2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 DNAJB3-202ENST00000449667 1266 ntBASIC18.25■□□□□ 0.51
BRD9Q9H8M2 AC211476.1-201ENST00000503899 468 ntBASIC18.25■□□□□ 0.51
BRD9Q9H8M2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRD9Q9H8M2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 AC073592.5-201ENST00000624854 528 ntBASIC18.24■□□□□ 0.51
BRD9Q9H8M2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRD9Q9H8M2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRD9Q9H8M2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRD9Q9H8M2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRD9Q9H8M2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.23■□□□□ 0.51
BRD9Q9H8M2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRD9Q9H8M2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms