Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 AIRN-201ENST00000601203 4374 ntBASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11YQ9BZA8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.83■■□□□ 1.24
PCDH11YQ9BZA8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH11YQ9BZA8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 AC093028.1-201ENST00000622998 982 ntBASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 CXCL1P1-201ENST00000502804 216 ntBASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 AL513210.1-201ENST00000629608 234 ntBASIC22.82■■□□□ 1.24
PCDH11YQ9BZA8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 PI4KAP1-204ENST00000612579 1703 ntBASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 AC135776.1-201ENST00000319817 2481 ntBASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 AC068137.2-201ENST00000605408 478 ntBASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 AC092902.6-201ENST00000641783 218 ntBASIC22.81■■□□□ 1.24
PCDH11YQ9BZA8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11YQ9BZA8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 AL590787.1-201ENST00000568856 1315 ntBASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 AL139400.1-201ENST00000366220 510 ntBASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 MIR770-201ENST00000390219 98 ntBASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11YQ9BZA8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms