Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 AIRN-201ENST00000601203 4374 ntBASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH11XQ9BZA7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.83■■□□□ 1.24
PCDH11XQ9BZA7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH11XQ9BZA7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 AC093028.1-201ENST00000622998 982 ntBASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 CXCL1P1-201ENST00000502804 216 ntBASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 AL513210.1-201ENST00000629608 234 ntBASIC22.82■■□□□ 1.24
PCDH11XQ9BZA7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 PI4KAP1-204ENST00000612579 1703 ntBASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 AC135776.1-201ENST00000319817 2481 ntBASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 AC068137.2-201ENST00000605408 478 ntBASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 AC092902.6-201ENST00000641783 218 ntBASIC22.81■■□□□ 1.24
PCDH11XQ9BZA7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH11XQ9BZA7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 AL590787.1-201ENST00000568856 1315 ntBASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 AL139400.1-201ENST00000366220 510 ntBASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 MIR770-201ENST00000390219 98 ntBASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH11XQ9BZA7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms