Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 AC074051.2-201ENST00000565115 352 ntBASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 LINC00167-201ENST00000530583 1419 ntBASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 TSPY12P-201ENST00000421279 868 ntBASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 AC011840.4-201ENST00000578471 627 ntBASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 Z69720.1-201ENST00000601483 472 ntBASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 AC093677.2-201ENST00000600169 1863 ntBASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.88□□□□□ -0.03
PCGF1Q9BSM1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms