Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF48Q96MX3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF48Q96MX3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF48Q96MX3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 NOC2LP2-201ENST00000407594 1944 ntBASIC14.41□□□□□ -0.1
ZNF48Q96MX3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 MIR940-201ENST00000401276 94 ntBASIC14.41□□□□□ -0.1
ZNF48Q96MX3 SLC25A6P5-201ENST00000435663 894 ntBASIC14.41□□□□□ -0.1
ZNF48Q96MX3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 AC139530.3-201ENST00000620344 690 ntBASIC14.41□□□□□ -0.1
ZNF48Q96MX3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF48Q96MX3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 AC093677.2-201ENST00000600169 1863 ntBASIC14.4□□□□□ -0.1
ZNF48Q96MX3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 AC132938.6-201ENST00000623828 1655 ntBASIC14.4□□□□□ -0.1
ZNF48Q96MX3 GMCL1P1-201ENST00000463439 1581 ntBASIC14.4□□□□□ -0.1
ZNF48Q96MX3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 KRT18P13-201ENST00000400056 1290 ntBASIC14.4□□□□□ -0.1
ZNF48Q96MX3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF48Q96MX3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AL139384.1-201ENST00000612143 3047 ntBASIC14.39□□□□□ -0.11
ZNF48Q96MX3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 RPS2P28-201ENST00000314255 741 ntBASIC14.39□□□□□ -0.11
ZNF48Q96MX3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms