Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.73■■□□□ 1.07
RPGRQ92834 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.73■■□□□ 1.07
RPGRQ92834 AC096734.2-201ENST00000562054 433 ntBASIC21.73■■□□□ 1.07
RPGRQ92834 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.73■■□□□ 1.07
RPGRQ92834 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.73■■□□□ 1.07
RPGRQ92834 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRQ92834 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.73■■□□□ 1.07
RPGRQ92834 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRQ92834 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
RPGRQ92834 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
RPGRQ92834 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.72■■□□□ 1.07
RPGRQ92834 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.72■■□□□ 1.07
RPGRQ92834 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 AP002414.1-201ENST00000391405 1147 ntBASIC21.72■■□□□ 1.07
RPGRQ92834 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.72■■□□□ 1.07
RPGRQ92834 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.72■■□□□ 1.07
RPGRQ92834 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.72■■□□□ 1.07
RPGRQ92834 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.72■■□□□ 1.07
RPGRQ92834 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.72■■□□□ 1.07
RPGRQ92834 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.72■■□□□ 1.07
RPGRQ92834 KRT19P2-202ENST00000557173 1012 ntBASIC21.72■■□□□ 1.07
RPGRQ92834 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RPGRQ92834 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.72■■□□□ 1.07
RPGRQ92834 GGTLC5P-201ENST00000617623 998 ntBASIC21.72■■□□□ 1.07
RPGRQ92834 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.72■■□□□ 1.07
RPGRQ92834 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.72■■□□□ 1.07
RPGRQ92834 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPGRQ92834 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.71■■□□□ 1.07
RPGRQ92834 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RPGRQ92834 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
RPGRQ92834 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 CROCCP3-202ENST00000420820 1947 ntBASIC21.71■■□□□ 1.07
RPGRQ92834 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.71■■□□□ 1.07
RPGRQ92834 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.71■■□□□ 1.07
RPGRQ92834 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
RPGRQ92834 AC100803.2-201ENST00000562459 1963 ntBASIC21.71■■□□□ 1.07
RPGRQ92834 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RPGRQ92834 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 AL031432.2-201ENST00000566714 459 ntBASIC21.71■■□□□ 1.07
RPGRQ92834 AL928711.1-201ENST00000570165 459 ntBASIC21.71■■□□□ 1.07
RPGRQ92834 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.71■■□□□ 1.07
RPGRQ92834 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.71■■□□□ 1.07
RPGRQ92834 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
RPGRQ92834 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.71■■□□□ 1.07
RPGRQ92834 AC009949.1-201ENST00000623048 1830 ntBASIC21.71■■□□□ 1.07
RPGRQ92834 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPGRQ92834 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RPGRQ92834 AC009336.1-201ENST00000608941 1553 ntBASIC21.7■■□□□ 1.06
RPGRQ92834 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.7■■□□□ 1.06
RPGRQ92834 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.7■■□□□ 1.06
RPGRQ92834 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.7■■□□□ 1.06
RPGRQ92834 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.7■■□□□ 1.06
RPGRQ92834 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.7■■□□□ 1.06
RPGRQ92834 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
RPGRQ92834 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.7■■□□□ 1.06
RPGRQ92834 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.7■■□□□ 1.06
RPGRQ92834 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RPGRQ92834 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.7■■□□□ 1.06
RPGRQ92834 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPGRQ92834 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.7■■□□□ 1.06
RPGRQ92834 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RPGRQ92834 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.69■■□□□ 1.06
RPGRQ92834 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
RPGRQ92834 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.69■■□□□ 1.06
RPGRQ92834 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RPGRQ92834 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 LINC00982-205ENST00000420957 435 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms