Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF3Q8TEJ3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 PGAM5P1-201ENST00000518923 814 ntBASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 AC027601.4-201ENST00000611259 610 ntBASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 AC004706.3-202ENST00000621574 984 ntBASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 AC006504.4-201ENST00000592118 1568 ntBASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.96■□□□□ 0.95
SH3RF3Q8TEJ3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
SH3RF3Q8TEJ3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 ELK2BP-201ENST00000415014 1224 ntBASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 MED15P5-201ENST00000423150 992 ntBASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 SIGLEC30P-201ENST00000455569 941 ntBASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 STK19B-204ENST00000512515 211 ntBASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 IGHV3-52-201ENST00000519770 353 ntBASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 GPALPP1-207ENST00000611650 899 ntBASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.95■□□□□ 0.94
SH3RF3Q8TEJ3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 AC136632.2-201ENST00000512891 861 ntBASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 MIR1199-201ENST00000621445 119 ntBASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
SH3RF3Q8TEJ3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms