Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 DDX43P3-201ENST00000441064 443 ntBASIC18.78■□□□□ 0.6
UBA3Q8TBC4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 AC096582.2-201ENST00000510860 516 ntBASIC18.78■□□□□ 0.6
UBA3Q8TBC4 FOSL1P1-201ENST00000511041 816 ntBASIC18.78■□□□□ 0.6
UBA3Q8TBC4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBA3Q8TBC4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 REXO1L11P-201ENST00000620964 1927 ntBASIC18.77■□□□□ 0.6
UBA3Q8TBC4 AL355312.1-201ENST00000407115 2176 ntBASIC18.77■□□□□ 0.6
UBA3Q8TBC4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 RCN1P2-201ENST00000398357 915 ntBASIC18.77■□□□□ 0.6
UBA3Q8TBC4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 AC009533.2-201ENST00000543664 586 ntBASIC18.77■□□□□ 0.6
UBA3Q8TBC4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 GNAS-203ENST00000306120 1878 ntBASIC18.77■□□□□ 0.6
UBA3Q8TBC4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBA3Q8TBC4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBA3Q8TBC4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBA3Q8TBC4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBA3Q8TBC4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBA3Q8TBC4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBA3Q8TBC4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
UBA3Q8TBC4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 CLEC4GP1-201ENST00000596555 870 ntBASIC18.76■□□□□ 0.59
UBA3Q8TBC4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBA3Q8TBC4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 COX5BP2-201ENST00000392354 334 ntBASIC18.75■□□□□ 0.59
UBA3Q8TBC4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 NUS1P2-201ENST00000417358 873 ntBASIC18.75■□□□□ 0.59
UBA3Q8TBC4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.75■□□□□ 0.59
UBA3Q8TBC4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms