Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 AC010460.3-201ENST00000511359 1579 ntBASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 AC106820.2-201ENST00000563775 3264 ntBASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 AC092910.1-201ENST00000482027 1129 ntBASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 AC145285.3-201ENST00000564603 959 ntBASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 MTDHP4-201ENST00000600287 670 ntBASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.59■□□□□ 0.57
SHKBP1Q8TBC3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 AC104109.2-201ENST00000602919 1418 ntBASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 PMS2P7-201ENST00000506558 1336 ntBASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHKBP1Q8TBC3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 AC098831.1-202ENST00000438821 336 ntBASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 AC008735.5-201ENST00000623544 497 ntBASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHKBP1Q8TBC3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 AC139713.2-201ENST00000641328 2723 ntBASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SHKBP1Q8TBC3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms