Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 AL805961.1-202ENST00000641562 540 ntBASIC21.74■■□□□ 1.07
RTL9Q8NET4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 AL020996.1-203ENST00000536896 2307 ntBASIC21.73■■□□□ 1.07
RTL9Q8NET4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 AC004408.2-201ENST00000623613 2777 ntBASIC21.73■■□□□ 1.07
RTL9Q8NET4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 AC004967.1-201ENST00000453589 447 ntBASIC21.73■■□□□ 1.07
RTL9Q8NET4 RNA5SP416-201ENST00000516838 111 ntBASIC21.73■■□□□ 1.07
RTL9Q8NET4 IGHV3-52-201ENST00000519770 353 ntBASIC21.73■■□□□ 1.07
RTL9Q8NET4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.73■■□□□ 1.07
RTL9Q8NET4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL9Q8NET4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 MYCLP1-201ENST00000372451 1075 ntBASIC21.72■■□□□ 1.07
RTL9Q8NET4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.72■■□□□ 1.07
RTL9Q8NET4 RPS8P6-201ENST00000426177 609 ntBASIC21.72■■□□□ 1.07
RTL9Q8NET4 AC004832.2-201ENST00000426397 482 ntBASIC21.72■■□□□ 1.07
RTL9Q8NET4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 STK19B-204ENST00000512515 211 ntBASIC21.72■■□□□ 1.07
RTL9Q8NET4 AC027796.2-201ENST00000575326 344 ntBASIC21.72■■□□□ 1.07
RTL9Q8NET4 AC008667.4-201ENST00000607370 168 ntBASIC21.72■■□□□ 1.07
RTL9Q8NET4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 AC134684.3-201ENST00000641758 218 ntBASIC21.72■■□□□ 1.07
RTL9Q8NET4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTL9Q8NET4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RTL9Q8NET4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RTL9Q8NET4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.71■■□□□ 1.07
RTL9Q8NET4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RTL9Q8NET4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.71■■□□□ 1.07
RTL9Q8NET4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.71■■□□□ 1.07
RTL9Q8NET4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.71■■□□□ 1.07
RTL9Q8NET4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTL9Q8NET4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RTL9Q8NET4 IGHV3-65-201ENST00000523210 341 ntBASIC21.71■■□□□ 1.07
RTL9Q8NET4 AC064836.3-201ENST00000607928 673 ntBASIC21.71■■□□□ 1.07
RTL9Q8NET4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.71■■□□□ 1.07
RTL9Q8NET4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
RTL9Q8NET4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms