Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 FZD10-202ENST00000539839 3282 ntBASIC18.23■□□□□ 0.51
PAF1Q8N7H5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 LINC00265-3P-201ENST00000447588 903 ntBASIC18.23■□□□□ 0.51
PAF1Q8N7H5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 AP002414.4-201ENST00000589764 1148 ntBASIC18.23■□□□□ 0.51
PAF1Q8N7H5 AC092329.2-201ENST00000598402 547 ntBASIC18.23■□□□□ 0.51
PAF1Q8N7H5 AL592071.1-201ENST00000611956 408 ntBASIC18.23■□□□□ 0.51
PAF1Q8N7H5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PAF1Q8N7H5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.22■□□□□ 0.51
PAF1Q8N7H5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.22■□□□□ 0.51
PAF1Q8N7H5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.22■□□□□ 0.51
PAF1Q8N7H5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 AC093677.2-201ENST00000600169 1863 ntBASIC18.21■□□□□ 0.51
PAF1Q8N7H5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 AP000867.3-201ENST00000524675 377 ntBASIC18.21■□□□□ 0.51
PAF1Q8N7H5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAF1Q8N7H5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms