Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
AFAP1Q8N556 AC093214.1-201ENST00000511688 1107 ntBASIC26.3■■□□□ 1.8
AFAP1Q8N556 KRT8P48-201ENST00000515599 1220 ntBASIC26.3■■□□□ 1.8
AFAP1Q8N556 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
AFAP1Q8N556 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
AFAP1Q8N556 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
AFAP1Q8N556 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 HNRNPFP1-201ENST00000391730 1133 ntBASIC26.29■■□□□ 1.8
AFAP1Q8N556 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 AC099522.2-201ENST00000607001 744 ntBASIC26.29■■□□□ 1.8
AFAP1Q8N556 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
AFAP1Q8N556 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC26.29■■□□□ 1.8
AFAP1Q8N556 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
AFAP1Q8N556 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
AFAP1Q8N556 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
AFAP1Q8N556 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
AFAP1Q8N556 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 AC005034.1-201ENST00000426657 489 ntBASIC26.28■■□□□ 1.8
AFAP1Q8N556 GSAP-205ENST00000430584 600 ntTSL 5 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 AL513480.1-201ENST00000451731 511 ntBASIC26.28■■□□□ 1.8
AFAP1Q8N556 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
AFAP1Q8N556 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 RNA5SP421-201ENST00000516864 134 ntBASIC26.28■■□□□ 1.8
AFAP1Q8N556 IGHV3-52-201ENST00000519770 353 ntBASIC26.28■■□□□ 1.8
AFAP1Q8N556 AC112191.1-201ENST00000523689 701 ntBASIC26.28■■□□□ 1.8
AFAP1Q8N556 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
AFAP1Q8N556 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC26.28■■□□□ 1.8
AFAP1Q8N556 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 DDX43P3-201ENST00000441064 443 ntBASIC26.27■■□□□ 1.8
AFAP1Q8N556 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 VPS29-207ENST00000549970 818 ntTSL 3 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 RPL28-209ENST00000560055 670 ntTSL 3 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC26.27■■□□□ 1.8
AFAP1Q8N556 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 AC073130.3-201ENST00000624389 2278 ntBASIC26.27■■□□□ 1.8
AFAP1Q8N556 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
AFAP1Q8N556 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
AFAP1Q8N556 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC26.26■■□□□ 1.79
AFAP1Q8N556 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
AFAP1Q8N556 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.26■■□□□ 1.79
AFAP1Q8N556 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
AFAP1Q8N556 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC26.26■■□□□ 1.79
AFAP1Q8N556 BX276092.7-203ENST00000637198 1536 ntBASIC26.26■■□□□ 1.79
AFAP1Q8N556 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
AFAP1Q8N556 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC26.26■■□□□ 1.79
AFAP1Q8N556 AL355306.1-201ENST00000415580 579 ntBASIC26.26■■□□□ 1.79
AFAP1Q8N556 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC26.26■■□□□ 1.79
AFAP1Q8N556 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms