Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SCML4Q8N228 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
SCML4Q8N228 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SCML4Q8N228 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.39■□□□□ 0.53
SCML4Q8N228 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.39■□□□□ 0.53
SCML4Q8N228 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
SCML4Q8N228 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCML4Q8N228 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SCML4Q8N228 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SCML4Q8N228 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 SCARNA2-201ENST00000458748 420 ntBASIC18.38■□□□□ 0.53
SCML4Q8N228 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.38■□□□□ 0.53
SCML4Q8N228 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 AL160237.2-201ENST00000556165 472 ntBASIC18.38■□□□□ 0.53
SCML4Q8N228 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 AL139327.4-201ENST00000612362 153 ntBASIC18.38■□□□□ 0.53
SCML4Q8N228 AL031008.1-201ENST00000619963 541 ntBASIC18.38■□□□□ 0.53
SCML4Q8N228 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 AL356309.3-201ENST00000624132 1934 ntBASIC18.38■□□□□ 0.53
SCML4Q8N228 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SCML4Q8N228 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCML4Q8N228 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.38■□□□□ 0.53
SCML4Q8N228 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SCML4Q8N228 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.37■□□□□ 0.53
SCML4Q8N228 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.37■□□□□ 0.53
SCML4Q8N228 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.37■□□□□ 0.53
SCML4Q8N228 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.37■□□□□ 0.53
SCML4Q8N228 AL020989.1-201ENST00000422979 469 ntBASIC18.37■□□□□ 0.53
SCML4Q8N228 AC079781.3-201ENST00000449110 356 ntBASIC18.37■□□□□ 0.53
SCML4Q8N228 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.37■□□□□ 0.53
SCML4Q8N228 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SCML4Q8N228 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SCML4Q8N228 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.37■□□□□ 0.53
SCML4Q8N228 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SCML4Q8N228 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SCML4Q8N228 AC009336.1-201ENST00000608941 1553 ntBASIC18.37■□□□□ 0.53
SCML4Q8N228 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
SCML4Q8N228 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SCML4Q8N228 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SCML4Q8N228 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCML4Q8N228 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.37■□□□□ 0.53
SCML4Q8N228 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SCML4Q8N228 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.36■□□□□ 0.53
SCML4Q8N228 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.36■□□□□ 0.53
SCML4Q8N228 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SCML4Q8N228 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms