Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.11■□□□□ 0.49
SIX5Q8N196 AC122714.2-201ENST00000502787 707 ntBASIC18.11■□□□□ 0.49
SIX5Q8N196 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.11■□□□□ 0.49
SIX5Q8N196 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.11■□□□□ 0.49
SIX5Q8N196 AL096865.1-201ENST00000606796 927 ntBASIC18.11■□□□□ 0.49
SIX5Q8N196 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.11■□□□□ 0.49
SIX5Q8N196 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SIX5Q8N196 AC004790.2-201ENST00000623588 572 ntBASIC18.11■□□□□ 0.49
SIX5Q8N196 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.11■□□□□ 0.49
SIX5Q8N196 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.11■□□□□ 0.49
SIX5Q8N196 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SIX5Q8N196 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.11■□□□□ 0.49
SIX5Q8N196 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.1■□□□□ 0.49
SIX5Q8N196 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SIX5Q8N196 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SIX5Q8N196 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.1■□□□□ 0.49
SIX5Q8N196 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 KRT8P47-201ENST00000604727 1398 ntBASIC18.1■□□□□ 0.49
SIX5Q8N196 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.1■□□□□ 0.49
SIX5Q8N196 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.1■□□□□ 0.49
SIX5Q8N196 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.1■□□□□ 0.49
SIX5Q8N196 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.1■□□□□ 0.49
SIX5Q8N196 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.1■□□□□ 0.49
SIX5Q8N196 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.1■□□□□ 0.49
SIX5Q8N196 AC093512.1-201ENST00000617969 520 ntBASIC18.1■□□□□ 0.49
SIX5Q8N196 AC073592.5-201ENST00000624854 528 ntBASIC18.1■□□□□ 0.49
SIX5Q8N196 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SIX5Q8N196 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SIX5Q8N196 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.1■□□□□ 0.49
SIX5Q8N196 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIX5Q8N196 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.1■□□□□ 0.49
SIX5Q8N196 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SIX5Q8N196 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SIX5Q8N196 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SIX5Q8N196 AC010460.3-201ENST00000511359 1579 ntBASIC18.09■□□□□ 0.49
SIX5Q8N196 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SIX5Q8N196 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.09■□□□□ 0.49
SIX5Q8N196 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SIX5Q8N196 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.09■□□□□ 0.49
SIX5Q8N196 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
SIX5Q8N196 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SIX5Q8N196 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX5Q8N196 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.09■□□□□ 0.49
SIX5Q8N196 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.09■□□□□ 0.49
SIX5Q8N196 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.09■□□□□ 0.49
SIX5Q8N196 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIX5Q8N196 HLA-J-203ENST00000494367 1087 ntBASIC18.09■□□□□ 0.49
SIX5Q8N196 IGHV3-65-201ENST00000523210 341 ntBASIC18.09■□□□□ 0.49
SIX5Q8N196 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.09■□□□□ 0.49
SIX5Q8N196 AC004449.1-201ENST00000564240 433 ntBASIC18.09■□□□□ 0.49
SIX5Q8N196 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX5Q8N196 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX5Q8N196 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIX5Q8N196 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX5Q8N196 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX5Q8N196 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
SIX5Q8N196 AL499627.1-201ENST00000569373 2188 ntBASIC18.08■□□□□ 0.49
SIX5Q8N196 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX5Q8N196 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.08■□□□□ 0.49
SIX5Q8N196 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
SIX5Q8N196 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.08■□□□□ 0.49
SIX5Q8N196 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX5Q8N196 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SIX5Q8N196 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIX5Q8N196 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX5Q8N196 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms