Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 AC148477.5-201ENST00000625164 1645 ntBASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 AC254562.1-201ENST00000417586 456 ntBASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 AL078644.1-201ENST00000609881 752 ntBASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TMEFF1Q8IYR6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 CYMP-203ENST00000474680 1263 ntBASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 RFPL4AP1-201ENST00000530883 850 ntBASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 AC004790.2-201ENST00000623588 572 ntBASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 AC132938.5-201ENST00000624980 1813 ntBASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 PHGDH-209ENST00000641074 1780 ntBASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEFF1Q8IYR6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 CNN2P11-201ENST00000429351 262 ntBASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 HCG4B-203ENST00000450128 991 ntBASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 RPS15P9-201ENST00000494093 319 ntBASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 NCF1C-201ENST00000438382 1427 ntBASIC17.52■□□□□ 0.4
TMEFF1Q8IYR6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TMEFF1Q8IYR6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.52■□□□□ 0.39
TMEFF1Q8IYR6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TMEFF1Q8IYR6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TMEFF1Q8IYR6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms