Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 RNF152P1-201ENST00000397754 604 ntBASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 HYMAI.1-201ENST00000620949 238 ntBASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC83Q8IWF9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 AK4P3-201ENST00000418260 669 ntBASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CCDC83Q8IWF9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC83Q8IWF9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC83Q8IWF9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC83Q8IWF9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC83Q8IWF9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 OR6D1P-202ENST00000641007 5290 ntBASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 GPR32P1-201ENST00000601788 811 ntBASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 AC099398.1-201ENST00000567919 2776 ntBASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCDC83Q8IWF9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms