Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 LINC00167-201ENST00000530583 1419 ntBASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.63■□□□□ 0.41
NUDCD3Q8IVD9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 ABHD17AP1-201ENST00000358206 933 ntBASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 AL355355.2-201ENST00000442321 338 ntBASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 BX088651.1-201ENST00000540551 451 ntBASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 MIR4651-201ENST00000582622 73 ntBASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUDCD3Q8IVD9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 AP001412.1-201ENST00000608405 714 ntBASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 AC092338.2-201ENST00000568827 1415 ntBASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 UBALD1-205ENST00000590891 2641 ntBASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms