Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 AC090164.3-201ENST00000610780 2143 ntBASIC19.73■□□□□ 0.75
TRIM50Q86XT4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM50Q86XT4 AL020996.1-203ENST00000536896 2307 ntBASIC19.73■□□□□ 0.75
TRIM50Q86XT4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 ZNF259P1-201ENST00000407656 1365 ntBASIC19.72■□□□□ 0.75
TRIM50Q86XT4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 RNA5SP415-201ENST00000517246 115 ntBASIC19.72■□□□□ 0.75
TRIM50Q86XT4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 AC034105.1-201ENST00000563488 319 ntBASIC19.72■□□□□ 0.75
TRIM50Q86XT4 AC145285.3-201ENST00000564603 959 ntBASIC19.72■□□□□ 0.75
TRIM50Q86XT4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 AL049757.1-201ENST00000616842 1596 ntBASIC19.72■□□□□ 0.75
TRIM50Q86XT4 AC117500.6-201ENST00000624871 588 ntBASIC19.72■□□□□ 0.75
TRIM50Q86XT4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 AC148477.5-201ENST00000625164 1645 ntBASIC19.72■□□□□ 0.75
TRIM50Q86XT4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRIM50Q86XT4 AC132938.5-201ENST00000624980 1813 ntBASIC19.72■□□□□ 0.75
TRIM50Q86XT4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 AC090340.1-201ENST00000620778 4980 ntBASIC19.71■□□□□ 0.75
TRIM50Q86XT4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 LAGE3P1-201ENST00000425356 484 ntBASIC19.71■□□□□ 0.75
TRIM50Q86XT4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 AC105339.3-201ENST00000560043 636 ntBASIC19.71■□□□□ 0.75
TRIM50Q86XT4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 TERC-201ENST00000602385 541 ntBASIC19.71■□□□□ 0.75
TRIM50Q86XT4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM50Q86XT4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms