Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 ABCD1P5-201ENST00000445663 754 ntBASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM4Q86VH4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRTM4Q86VH4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
LRRTM4Q86VH4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRTM4Q86VH4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 RBM17P3-201ENST00000417687 1192 ntBASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 AP001269.4-201ENST00000609611 512 ntBASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM4Q86VH4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 AC007613.1-201ENST00000572811 2597 ntBASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 AC106795.1-205ENST00000512851 1056 ntBASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 AF238378.1-201ENST00000526806 358 ntBASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 AC008608.2-201ENST00000606089 416 ntBASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM4Q86VH4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms