Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAI1Q7Z5J4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAI1Q7Z5J4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAI1Q7Z5J4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 KRT18P2-201ENST00000447938 1258 ntBASIC15.05■□□□□ 0
RAI1Q7Z5J4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 AC018845.2-201ENST00000568326 409 ntBASIC15.05■□□□□ 0
RAI1Q7Z5J4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 AC064836.3-201ENST00000607928 673 ntBASIC15.05■□□□□ 0
RAI1Q7Z5J4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 AC134684.3-201ENST00000641758 218 ntBASIC15.05■□□□□ 0
RAI1Q7Z5J4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAI1Q7Z5J4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAI1Q7Z5J4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAI1Q7Z5J4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.05■□□□□ 0
RAI1Q7Z5J4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI1Q7Z5J4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
RAI1Q7Z5J4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI1Q7Z5J4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI1Q7Z5J4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.05■□□□□ -0
RAI1Q7Z5J4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.05■□□□□ -0
RAI1Q7Z5J4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.05■□□□□ -0
RAI1Q7Z5J4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.05■□□□□ -0
RAI1Q7Z5J4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.05■□□□□ -0
RAI1Q7Z5J4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.05■□□□□ -0
RAI1Q7Z5J4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAI1Q7Z5J4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI1Q7Z5J4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAI1Q7Z5J4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAI1Q7Z5J4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC007613.1-201ENST00000572811 2597 ntBASIC15.04■□□□□ -0
RAI1Q7Z5J4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC112482.1-201ENST00000492080 688 ntBASIC15.04■□□□□ -0
RAI1Q7Z5J4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI1Q7Z5J4 CRYGEP-201ENST00000412192 528 ntBASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC211486.1-202ENST00000416371 468 ntBASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 HCG4B-203ENST00000450128 991 ntBASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC211476.1-201ENST00000503899 468 ntBASIC15.04■□□□□ -0
RAI1Q7Z5J4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.04■□□□□ -0
RAI1Q7Z5J4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms