Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 PIN1P1-201ENST00000412108 996 ntBASIC14.82□□□□□ -0.04
CSMD2Q7Z408 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 RPS2P32-201ENST00000439199 892 ntBASIC14.81□□□□□ -0.04
CSMD2Q7Z408 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 AL353593.2-201ENST00000602529 1483 ntBASIC14.81□□□□□ -0.04
CSMD2Q7Z408 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 MIR1909-201ENST00000411312 80 ntBASIC14.81□□□□□ -0.04
CSMD2Q7Z408 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD2Q7Z408 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.8□□□□□ -0.04
CSMD2Q7Z408 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.8□□□□□ -0.04
CSMD2Q7Z408 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 AC097493.3-201ENST00000509725 367 ntBASIC14.8□□□□□ -0.04
CSMD2Q7Z408 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 SLC25A39P2-201ENST00000537614 270 ntBASIC14.8□□□□□ -0.04
CSMD2Q7Z408 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD2Q7Z408 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 KLF4P1-201ENST00000412782 1185 ntBASIC14.79□□□□□ -0.04
CSMD2Q7Z408 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD2Q7Z408 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms