Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ASAH1-257ENST00000637752 2708 nt8.52□□□□□ -1.056e-7■□□□□ 8.5
SND1Q7KZF4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.79■■□□□ 1.882e-26■□□□□ 8.5
SND1Q7KZF4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.52e-26■□□□□ 8.5
SND1Q7KZF4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.622e-26■□□□□ 8.5
SND1Q7KZF4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.89e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-201ENST00000236017 663 ntTSL 218.65■□□□□ 0.589e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.68■□□□□ 0.429e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.319e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-208ENST00000486720 447 ntTSL 215.28■□□□□ 0.049e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-202ENST00000359944 1054 ntTSL 1 (best)15.07■□□□□ 09e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-203ENST00000468210 824 ntTSL 214.96□□□□□ -0.019e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.82□□□□□ -0.049e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-205ENST00000461320 1038 ntTSL 312.58□□□□□ -0.49e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-210ENST00000482604 671 ntTSL 512.25□□□□□ -0.459e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-205ENST00000472629 744 ntTSL 3 BASIC12.11□□□□□ -0.479e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-209ENST00000480374 729 ntTSL 312.02□□□□□ -0.499e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-201ENST00000259037 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.619e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC9.75□□□□□ -0.859e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-204ENST00000471112 684 ntTSL 39.24□□□□□ -0.939e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-207ENST00000476587 635 ntTSL 28.98□□□□□ -0.979e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-215ENST00000496904 175 ntTSL 58.66□□□□□ -1.029e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-212ENST00000491054 1014 ntTSL 28.31□□□□□ -1.089e-9■□□□□ 8.5
SND1Q7KZF4 APH1A-207ENST00000486308 574 ntTSL 37.7□□□□□ -1.189e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-206ENST00000473500 689 ntTSL 37.11□□□□□ -1.279e-9■□□□□ 8.5
SND1Q7KZF4 NDUFB5-213ENST00000493716 476 ntTSL 26.86□□□□□ -1.319e-9■□□□□ 8.5
SND1Q7KZF4 HIST1H2BN-202ENST00000449538 715 ntTSL 1 (best)18.11■□□□□ 0.494e-7■□□□□ 8.4
SND1Q7KZF4 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC9.67□□□□□ -0.864e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.444e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.444e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.584e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC11.02□□□□□ -0.654e-7■□□□□ 8.4
SND1Q7KZF4 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.664e-7■□□□□ 8.4
SND1Q7KZF4 TTC3-223ENST00000492275 769 ntTSL 326.72■■□□□ 1.871e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.57■■□□□ 1.681e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-212ENST00000463216 842 ntTSL 524.81■■□□□ 1.561e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-224ENST00000494243 861 ntTSL 524.61■■□□□ 1.531e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-210ENST00000450533 2451 ntTSL 1 (best)24.39■■□□□ 1.51e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-217ENST00000481605 1540 ntTSL 524.15■■□□□ 1.461e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.19■□□□□ 0.661e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-209ENST00000438055 3606 ntTSL 518.54■□□□□ 0.561e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-207ENST00000418766 3771 ntTSL 518.25■□□□□ 0.511e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-219ENST00000485402 3626 ntTSL 516.55■□□□□ 0.241e-6■□□□□ 8.4
SND1Q7KZF4 PLOD3-207ENST00000456079 563 ntTSL 415.33■□□□□ 0.041e-6■□□□□ 8.4
SND1Q7KZF4 FAM234A-209ENST00000424016 646 ntTSL 314.62□□□□□ -0.071e-6■□□□□ 8.4
SND1Q7KZF4 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.691e-6■□□□□ 8.4
SND1Q7KZF4 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC9.93□□□□□ -0.821e-6■□□□□ 8.4
SND1Q7KZF4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.131e-6■□□□□ 8.4
SND1Q7KZF4 CPOX-203ENST00000512905 593 ntTSL 57.33□□□□□ -1.241e-6■□□□□ 8.4
SND1Q7KZF4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.251e-6■□□□□ 8.4
SND1Q7KZF4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.281e-6■□□□□ 8.4
SND1Q7KZF4 TALDO1-209ENST00000533796 503 ntTSL 212.31□□□□□ -0.441e-17■□□□□ 8.4
SND1Q7KZF4 TALDO1-204ENST00000530119 1191 ntTSL 212.07□□□□□ -0.481e-17■□□□□ 8.4
SND1Q7KZF4 MCM7-211ENST00000491245 648 ntTSL 1 (best)9.41□□□□□ -0.95e-7■□□□□ 8.4
SND1Q7KZF4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.26e-15■□□□□ 8.4
SND1Q7KZF4 NOMO1-204ENST00000566823 1898 ntTSL 213.87□□□□□ -0.191e-28■□□□□ 8.4
SND1Q7KZF4 NOMO1-202ENST00000565655 666 ntTSL 311.19□□□□□ -0.621e-28■□□□□ 8.4
SND1Q7KZF4 NDUFA13-205ENST00000511180 593 ntTSL 216.03■□□□□ 0.163e-12■□□□□ 8.4
SND1Q7KZF4 LSR-208ENST00000599658 343 ntTSL 312.2□□□□□ -0.461e-8■□□□□ 8.4
SND1Q7KZF4 FGFR4-206ENST00000483872 663 ntTSL 311.79□□□□□ -0.525e-17■□□□□ 8.4
SND1Q7KZF4 BSG-212ENST00000590218 545 ntTSL 220.04■□□□□ 0.82e-26■□□□□ 8.4
SND1Q7KZF4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.361e-6■□□□□ 8.4
SND1Q7KZF4 MCM7-204ENST00000425308 1497 ntTSL 329.34■■■□□ 2.291e-6■□□□□ 8.4
SND1Q7KZF4 MDH2-207ENST00000490105 569 ntTSL 323.12■■□□□ 1.294e-11■□□□□ 8.4
SND1Q7KZF4 RUVBL2-209ENST00000596837 682 ntTSL 222.58■■□□□ 1.211e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.071e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-203ENST00000594017 959 ntTSL 221.22■□□□□ 0.991e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-202ENST00000593570 813 ntTSL 521.13■□□□□ 0.971e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-204ENST00000594338 1853 ntTSL 520.63■□□□□ 0.891e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.53■□□□□ 0.881e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.841e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-208ENST00000596247 1563 ntTSL 219.91■□□□□ 0.781e-6■□□□□ 8.4
SND1Q7KZF4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.88■□□□□ 0.776e-7■□□□□ 8.4
SND1Q7KZF4 MAGEA6-202ENST00000412733 862 ntTSL 519.19■□□□□ 0.664e-11■□□□□ 8.4
SND1Q7KZF4 COPS6-210ENST00000496358 610 ntTSL 219.01■□□□□ 0.631e-6■□□□□ 8.4
SND1Q7KZF4 COPS6-206ENST00000468499 745 ntTSL 318.32■□□□□ 0.521e-6■□□□□ 8.4
SND1Q7KZF4 FERMT3-208ENST00000545896 911 ntTSL 518.16■□□□□ 0.51e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-204ENST00000463900 1645 ntTSL 1 (best)18.16■□□□□ 0.51e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-201ENST00000221413 1478 ntTSL 1 (best)17.98■□□□□ 0.471e-6■□□□□ 8.4
SND1Q7KZF4 FERMT3-203ENST00000540554 379 ntTSL 317.83■□□□□ 0.441e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-202ENST00000425118 1581 ntTSL 1 (best)17.66■□□□□ 0.421e-6■□□□□ 8.4
SND1Q7KZF4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.361e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-214ENST00000480194 455 ntTSL 517.22■□□□□ 0.351e-6■□□□□ 8.4
SND1Q7KZF4 CD37-210ENST00000597033 563 ntTSL 417.06■□□□□ 0.321e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-206ENST00000466894 1658 ntTSL 517.01■□□□□ 0.311e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-203ENST00000460341 565 ntTSL 416.87■□□□□ 0.291e-6■□□□□ 8.4
SND1Q7KZF4 MAGEA6-203ENST00000457643 921 ntTSL 316.83■□□□□ 0.284e-11■□□□□ 8.4
SND1Q7KZF4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.82■□□□□ 0.286e-7■□□□□ 8.4
SND1Q7KZF4 SDHC-209ENST00000515731 651 ntTSL 316.6■□□□□ 0.251e-6■□□□□ 8.4
SND1Q7KZF4 OCIAD1-227ENST00000513641 577 ntTSL 516.31■□□□□ 0.21e-6■□□□□ 8.4
SND1Q7KZF4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.181e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.92■□□□□ 0.141e-6■□□□□ 8.4
SND1Q7KZF4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.131e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.72■□□□□ 0.111e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.53■□□□□ 0.081e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.53■□□□□ 0.081e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-206ENST00000463448 1589 ntTSL 1 (best)15.45■□□□□ 0.061e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-216ENST00000486421 505 ntTSL 515.4■□□□□ 0.061e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-209ENST00000473166 752 ntTSL 315.18■□□□□ 0.021e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.051e-6■□□□□ 8.4
SND1Q7KZF4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.066e-7■□□□□ 8.4
Retrieved 100 of 13,567 protein–RNA pairs in 42.4 ms