Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 AC022188.1-201ENST00000620960 1664 ntBASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 AC138969.2-201ENST00000532739 9932 ntBASIC13.78□□□□□ -0.2
KCNIP4Q6PIL6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.77□□□□□ -0.2
KCNIP4Q6PIL6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KCNIP4Q6PIL6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KCNIP4Q6PIL6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
KCNIP4Q6PIL6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 AL512625.2-201ENST00000417533 625 ntBASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 KRT8P32-201ENST00000512863 1461 ntBASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 AF201337.1-201ENST00000520239 748 ntBASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.77□□□□□ -0.21
KCNIP4Q6PIL6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 SLC29A4P1-201ENST00000398760 971 ntBASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 AC105036.2-201ENST00000569468 176 ntBASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 AC005052.1-201ENST00000625181 2492 ntBASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 AL161772.1-201ENST00000610494 4412 ntBASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms