Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LCN1P1Q5VSP4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 PRORSD1P-201ENST00000295112 541 ntBASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 GCSHP5-201ENST00000443090 522 ntBASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 AL158047.1-201ENST00000445918 881 ntBASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 AP003071.4-201ENST00000562276 1284 ntBASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 C2orf69P3-201ENST00000565542 1120 ntBASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCN1P1Q5VSP4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 AL391005.1-201ENST00000623953 2435 ntBASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 RBM17P1-201ENST00000453646 1190 ntBASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 AC010653.2-201ENST00000623505 997 ntBASIC16.05■□□□□ 0.16
LCN1P1Q5VSP4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms