Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 MIR935-201ENST00000401179 91 ntBASIC15.9■□□□□ 0.14
CCDC58Q4VC31 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 AC090192.1-201ENST00000517740 490 ntBASIC15.9■□□□□ 0.14
CCDC58Q4VC31 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 MIR4674-201ENST00000582457 87 ntBASIC15.9■□□□□ 0.14
CCDC58Q4VC31 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC58Q4VC31 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
CCDC58Q4VC31 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.89■□□□□ 0.13
CCDC58Q4VC31 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 AC097488.1-201ENST00000507834 756 ntBASIC15.89■□□□□ 0.13
CCDC58Q4VC31 RPPH1-201ENST00000516869 333 ntBASIC15.89■□□□□ 0.13
CCDC58Q4VC31 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 WWOX-216ENST00000569818 525 ntBASIC15.89■□□□□ 0.13
CCDC58Q4VC31 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 AC022898.2-201ENST00000616822 1312 ntBASIC15.89■□□□□ 0.13
CCDC58Q4VC31 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC58Q4VC31 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 OR6D1P-203ENST00000641209 4860 ntBASIC15.88■□□□□ 0.13
CCDC58Q4VC31 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 FAM197Y1-201ENST00000421178 764 ntBASIC15.88■□□□□ 0.13
CCDC58Q4VC31 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 AC104390.1-201ENST00000555663 520 ntBASIC15.88■□□□□ 0.13
CCDC58Q4VC31 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 CD177P1-201ENST00000606252 935 ntBASIC15.88■□□□□ 0.13
CCDC58Q4VC31 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC58Q4VC31 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms