Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.33■□□□□ 0.04
RSPO1Q2MKA7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 TPSP2-201ENST00000561760 610 ntBASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 MIR3180-1-201ENST00000580374 94 ntBASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 MIR3180-3-201ENST00000584616 94 ntBASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 AP000550.4-202ENST00000639755 178 ntBASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 AL049757.1-201ENST00000616842 1596 ntBASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO1Q2MKA7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 AC106820.2-201ENST00000563775 3264 ntBASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 DRAXINP1-201ENST00000437611 948 ntBASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 AC002558.1-201ENST00000488906 803 ntBASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 AC122714.2-201ENST00000502787 707 ntBASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 AL139327.4-201ENST00000612362 153 ntBASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 KRT18P1-202ENST00000452408 1331 ntBASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 AC233702.3-201ENST00000578656 1387 ntBASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO1Q2MKA7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RSPO1Q2MKA7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms