Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP1Q04837 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP1Q04837 CYP2T1P-202ENST00000641596 2535 ntBASIC15.02□□□□□ -0.01
SSBP1Q04837 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP1Q04837 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SSBP1Q04837 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP1Q04837 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP1Q04837 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP1Q04837 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP1Q04837 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.02□□□□□ -0.01
SSBP1Q04837 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP1Q04837 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SSBP1Q04837 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.01□□□□□ -0.01
SSBP1Q04837 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.01□□□□□ -0.01
SSBP1Q04837 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.01□□□□□ -0.01
SSBP1Q04837 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SSBP1Q04837 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 AC005915.1-201ENST00000624912 2018 ntBASIC15.01□□□□□ -0.01
SSBP1Q04837 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.01□□□□□ -0.01
SSBP1Q04837 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.01□□□□□ -0.01
SSBP1Q04837 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.01□□□□□ -0.01
SSBP1Q04837 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SSBP1Q04837 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.01□□□□□ -0.01
SSBP1Q04837 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.01□□□□□ -0.01
SSBP1Q04837 LYSMD4-203ENST00000378904 2122 ntBASIC15.01□□□□□ -0.01
SSBP1Q04837 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.01□□□□□ -0.01
SSBP1Q04837 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSBP1Q04837 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SSBP1Q04837 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP1Q04837 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.01□□□□□ -0.01
SSBP1Q04837 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15□□□□□ -0.01
SSBP1Q04837 LINC02012-201ENST00000608206 1725 ntBASIC15□□□□□ -0.01
SSBP1Q04837 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15□□□□□ -0.01
SSBP1Q04837 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15□□□□□ -0.01
SSBP1Q04837 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15□□□□□ -0.01
SSBP1Q04837 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SSBP1Q04837 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15□□□□□ -0.01
SSBP1Q04837 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 AC005104.2-201ENST00000427818 678 ntBASIC15□□□□□ -0.01
SSBP1Q04837 MFAP1P1-201ENST00000442257 1255 ntBASIC15□□□□□ -0.01
SSBP1Q04837 AC026366.1-201ENST00000488803 879 ntBASIC15□□□□□ -0.01
SSBP1Q04837 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15□□□□□ -0.01
SSBP1Q04837 AC233263.1-201ENST00000578059 224 ntBASIC15□□□□□ -0.01
SSBP1Q04837 MIR4674-201ENST00000582457 87 ntBASIC15□□□□□ -0.01
SSBP1Q04837 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15□□□□□ -0.01
SSBP1Q04837 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15□□□□□ -0.01
SSBP1Q04837 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP1Q04837 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSBP1Q04837 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15□□□□□ -0.01
SSBP1Q04837 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms