Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 DDX43P3-201ENST00000441064 443 ntBASIC19.45■□□□□ 0.7
UBXN1Q04323 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.45■□□□□ 0.7
UBXN1Q04323 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.45■□□□□ 0.7
UBXN1Q04323 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.45■□□□□ 0.7
UBXN1Q04323 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.45■□□□□ 0.7
UBXN1Q04323 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.45■□□□□ 0.7
UBXN1Q04323 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
UBXN1Q04323 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.45■□□□□ 0.7
UBXN1Q04323 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.45■□□□□ 0.7
UBXN1Q04323 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.45■□□□□ 0.7
UBXN1Q04323 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
UBXN1Q04323 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBXN1Q04323 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.45■□□□□ 0.7
UBXN1Q04323 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBXN1Q04323 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBXN1Q04323 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
UBXN1Q04323 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 KRT18P22-201ENST00000402024 1347 ntBASIC19.45■□□□□ 0.7
UBXN1Q04323 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBXN1Q04323 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBXN1Q04323 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
UBXN1Q04323 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
UBXN1Q04323 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.44■□□□□ 0.7
UBXN1Q04323 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UBXN1Q04323 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UBXN1Q04323 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UBXN1Q04323 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UBXN1Q04323 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBXN1Q04323 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.44■□□□□ 0.7
UBXN1Q04323 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.43■□□□□ 0.7
UBXN1Q04323 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 KRT89P-201ENST00000620027 1478 ntBASIC19.43■□□□□ 0.7
UBXN1Q04323 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBXN1Q04323 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.43■□□□□ 0.7
UBXN1Q04323 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.43■□□□□ 0.7
UBXN1Q04323 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.43■□□□□ 0.7
UBXN1Q04323 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.43■□□□□ 0.7
UBXN1Q04323 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.43■□□□□ 0.7
UBXN1Q04323 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UBXN1Q04323 AL138966.2-201ENST00000621997 464 ntBASIC19.43■□□□□ 0.7
UBXN1Q04323 NKILA-202ENST00000614771 2598 ntBASIC19.43■□□□□ 0.7
UBXN1Q04323 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.43■□□□□ 0.7
UBXN1Q04323 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
UBXN1Q04323 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
UBXN1Q04323 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBXN1Q04323 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.42■□□□□ 0.7
UBXN1Q04323 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UBXN1Q04323 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.42■□□□□ 0.7
UBXN1Q04323 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBXN1Q04323 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBXN1Q04323 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBXN1Q04323 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.42■□□□□ 0.7
UBXN1Q04323 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.42■□□□□ 0.7
UBXN1Q04323 RASA4DP-201ENST00000460726 1199 ntBASIC19.42■□□□□ 0.7
UBXN1Q04323 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.42■□□□□ 0.7
UBXN1Q04323 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.42■□□□□ 0.7
UBXN1Q04323 AC079602.3-201ENST00000623931 403 ntBASIC19.42■□□□□ 0.7
UBXN1Q04323 AL023973.1-201ENST00000624619 620 ntBASIC19.42■□□□□ 0.7
UBXN1Q04323 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms