Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.63□□□□□ -0.07
SRPXP78539 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.63□□□□□ -0.07
SRPXP78539 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.63□□□□□ -0.07
SRPXP78539 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.63□□□□□ -0.07
SRPXP78539 MIR4674-201ENST00000582457 87 ntBASIC14.63□□□□□ -0.07
SRPXP78539 AC104771.1-201ENST00000603335 964 ntBASIC14.63□□□□□ -0.07
SRPXP78539 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SRPXP78539 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SRPXP78539 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.63□□□□□ -0.07
SRPXP78539 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.63□□□□□ -0.07
SRPXP78539 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SRPXP78539 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.63□□□□□ -0.07
SRPXP78539 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.63□□□□□ -0.07
SRPXP78539 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.63□□□□□ -0.07
SRPXP78539 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRPXP78539 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SRPXP78539 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.62□□□□□ -0.07
SRPXP78539 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.62□□□□□ -0.07
SRPXP78539 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.62□□□□□ -0.07
SRPXP78539 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SRPXP78539 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SRPXP78539 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRPXP78539 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SRPXP78539 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
SRPXP78539 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SRPXP78539 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SRPXP78539 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SRPXP78539 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SRPXP78539 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.61□□□□□ -0.07
SRPXP78539 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.61□□□□□ -0.07
SRPXP78539 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.61□□□□□ -0.07
SRPXP78539 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.61□□□□□ -0.07
SRPXP78539 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRPXP78539 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.61□□□□□ -0.07
SRPXP78539 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms