Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRA2BP62995 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.72■□□□□ 0.27
TRA2BP62995 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRA2BP62995 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 AC016396.2-201ENST00000562575 1417 ntBASIC16.72■□□□□ 0.27
TRA2BP62995 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.72■□□□□ 0.27
TRA2BP62995 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRA2BP62995 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRA2BP62995 TSSC2-201ENST00000450217 709 ntBASIC16.72■□□□□ 0.27
TRA2BP62995 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.72■□□□□ 0.27
TRA2BP62995 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.72■□□□□ 0.27
TRA2BP62995 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRA2BP62995 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRA2BP62995 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 IER3-202ENST00000376377 1350 ntBASIC16.72■□□□□ 0.27
TRA2BP62995 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRA2BP62995 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
TRA2BP62995 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRA2BP62995 SIRPAP1-201ENST00000448467 1770 ntBASIC16.72■□□□□ 0.27
TRA2BP62995 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.71■□□□□ 0.27
TRA2BP62995 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRA2BP62995 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.71■□□□□ 0.27
TRA2BP62995 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.71■□□□□ 0.27
TRA2BP62995 FAM220CP-201ENST00000395253 831 ntBASIC16.71■□□□□ 0.27
TRA2BP62995 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 AC103564.2-201ENST00000432853 1299 ntBASIC16.71■□□□□ 0.27
TRA2BP62995 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.71■□□□□ 0.27
TRA2BP62995 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.71■□□□□ 0.27
TRA2BP62995 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.71■□□□□ 0.27
TRA2BP62995 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.71■□□□□ 0.27
TRA2BP62995 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRA2BP62995 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 AL139327.4-201ENST00000612362 153 ntBASIC16.71■□□□□ 0.27
TRA2BP62995 AP000550.4-202ENST00000639755 178 ntBASIC16.71■□□□□ 0.27
TRA2BP62995 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRA2BP62995 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRA2BP62995 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRA2BP62995 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
TRA2BP62995 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRA2BP62995 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.7■□□□□ 0.26
TRA2BP62995 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.7■□□□□ 0.26
TRA2BP62995 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRA2BP62995 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRA2BP62995 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRA2BP62995 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRA2BP62995 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.7■□□□□ 0.26
TRA2BP62995 AC020916.1-201ENST00000587762 1774 ntBASIC16.7■□□□□ 0.26
TRA2BP62995 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRA2BP62995 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TRA2BP62995 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRA2BP62995 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.7■□□□□ 0.26
TRA2BP62995 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRA2BP62995 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.7■□□□□ 0.26
TRA2BP62995 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.7■□□□□ 0.26
TRA2BP62995 DRAXINP1-201ENST00000437611 948 ntBASIC16.7■□□□□ 0.26
TRA2BP62995 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.7■□□□□ 0.26
TRA2BP62995 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.7■□□□□ 0.26
TRA2BP62995 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.7■□□□□ 0.26
TRA2BP62995 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.7■□□□□ 0.26
TRA2BP62995 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.7■□□□□ 0.26
TRA2BP62995 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRA2BP62995 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRA2BP62995 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.7■□□□□ 0.26
TRA2BP62995 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRA2BP62995 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms