Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.63■□□□□ 0.57
USP46P62068 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.63■□□□□ 0.57
USP46P62068 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.63■□□□□ 0.57
USP46P62068 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.63■□□□□ 0.57
USP46P62068 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP46P62068 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.63■□□□□ 0.57
USP46P62068 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
USP46P62068 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP46P62068 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.63■□□□□ 0.57
USP46P62068 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
USP46P62068 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP46P62068 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.62■□□□□ 0.57
USP46P62068 AC012313.1-201ENST00000593393 3059 ntBASIC18.62■□□□□ 0.57
USP46P62068 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.62■□□□□ 0.57
USP46P62068 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.62■□□□□ 0.57
USP46P62068 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
USP46P62068 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 KRT18P67-201ENST00000432816 1264 ntBASIC18.62■□□□□ 0.57
USP46P62068 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP46P62068 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.62■□□□□ 0.57
USP46P62068 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.62■□□□□ 0.57
USP46P62068 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.62■□□□□ 0.57
USP46P62068 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.62■□□□□ 0.57
USP46P62068 AP000867.4-201ENST00000641616 219 ntBASIC18.62■□□□□ 0.57
USP46P62068 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.62■□□□□ 0.57
USP46P62068 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.62■□□□□ 0.57
USP46P62068 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 AC009949.1-201ENST00000623048 1830 ntBASIC18.62■□□□□ 0.57
USP46P62068 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 BICD1-207ENST00000551848 1962 ntBASIC18.62■□□□□ 0.57
USP46P62068 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP46P62068 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.62■□□□□ 0.57
USP46P62068 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP46P62068 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
USP46P62068 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.61■□□□□ 0.57
USP46P62068 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
USP46P62068 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.61■□□□□ 0.57
USP46P62068 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.61■□□□□ 0.57
USP46P62068 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.61■□□□□ 0.57
USP46P62068 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 HNRNPDP1-201ENST00000439535 754 ntBASIC18.61■□□□□ 0.57
USP46P62068 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.61■□□□□ 0.57
USP46P62068 AC018712.1-201ENST00000455767 687 ntBASIC18.61■□□□□ 0.57
USP46P62068 RNPS1P1-201ENST00000507437 918 ntBASIC18.61■□□□□ 0.57
USP46P62068 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
USP46P62068 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.61■□□□□ 0.57
USP46P62068 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.61■□□□□ 0.57
USP46P62068 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.61■□□□□ 0.57
USP46P62068 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.61■□□□□ 0.57
USP46P62068 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.61■□□□□ 0.57
USP46P62068 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP46P62068 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP46P62068 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP46P62068 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.6■□□□□ 0.57
USP46P62068 SIRPAP1-201ENST00000448467 1770 ntBASIC18.6■□□□□ 0.57
USP46P62068 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP46P62068 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.6■□□□□ 0.57
USP46P62068 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP46P62068 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP46P62068 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.6■□□□□ 0.57
USP46P62068 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP46P62068 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.6■□□□□ 0.57
USP46P62068 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.6■□□□□ 0.57
USP46P62068 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms