Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.84■□□□□ 0.45
AP1S1P61966 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.84■□□□□ 0.45
AP1S1P61966 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.84■□□□□ 0.45
AP1S1P61966 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.84■□□□□ 0.45
AP1S1P61966 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.84■□□□□ 0.45
AP1S1P61966 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.84■□□□□ 0.45
AP1S1P61966 AL691432.3-201ENST00000621860 400 ntBASIC17.84■□□□□ 0.45
AP1S1P61966 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
AP1S1P61966 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
AP1S1P61966 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.83■□□□□ 0.45
AP1S1P61966 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S1P61966 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
AP1S1P61966 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.83■□□□□ 0.44
AP1S1P61966 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S1P61966 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S1P61966 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.83■□□□□ 0.44
AP1S1P61966 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S1P61966 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.83■□□□□ 0.44
AP1S1P61966 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.83■□□□□ 0.44
AP1S1P61966 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S1P61966 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.83■□□□□ 0.44
AP1S1P61966 AC019129.2-201ENST00000609837 1235 ntBASIC17.83■□□□□ 0.44
AP1S1P61966 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
AP1S1P61966 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
AP1S1P61966 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S1P61966 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.83■□□□□ 0.44
AP1S1P61966 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S1P61966 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S1P61966 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S1P61966 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S1P61966 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
AP1S1P61966 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S1P61966 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S1P61966 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S1P61966 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP1S1P61966 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP1S1P61966 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.82■□□□□ 0.44
AP1S1P61966 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 GNAS-203ENST00000306120 1878 ntBASIC17.82■□□□□ 0.44
AP1S1P61966 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
AP1S1P61966 SIRPAP1-201ENST00000448467 1770 ntBASIC17.82■□□□□ 0.44
AP1S1P61966 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP1S1P61966 ABCD1P5-201ENST00000445663 754 ntBASIC17.82■□□□□ 0.44
AP1S1P61966 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S1P61966 AC132008.2-207ENST00000454517 770 ntBASIC17.82■□□□□ 0.44
AP1S1P61966 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
AP1S1P61966 IGHV3-52-201ENST00000519770 353 ntBASIC17.82■□□□□ 0.44
AP1S1P61966 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.82■□□□□ 0.44
AP1S1P61966 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.82■□□□□ 0.44
AP1S1P61966 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S1P61966 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 REXO1L6P-202ENST00000619970 1078 ntBASIC17.82■□□□□ 0.44
AP1S1P61966 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP1S1P61966 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP1S1P61966 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 REXO1L11P-201ENST00000620964 1927 ntBASIC17.82■□□□□ 0.44
AP1S1P61966 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S1P61966 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S1P61966 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.81■□□□□ 0.44
AP1S1P61966 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.81■□□□□ 0.44
AP1S1P61966 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.81■□□□□ 0.44
AP1S1P61966 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.81■□□□□ 0.44
AP1S1P61966 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.81■□□□□ 0.44
AP1S1P61966 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.81■□□□□ 0.44
AP1S1P61966 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.81■□□□□ 0.44
AP1S1P61966 MYCLP1-201ENST00000372451 1075 ntBASIC17.81■□□□□ 0.44
AP1S1P61966 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.81■□□□□ 0.44
AP1S1P61966 RBM17P3-201ENST00000417687 1192 ntBASIC17.81■□□□□ 0.44
AP1S1P61966 UNC93B7-201ENST00000509439 705 ntBASIC17.81■□□□□ 0.44
AP1S1P61966 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms