Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCKAP1LP55160 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCKAP1LP55160 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCKAP1LP55160 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCKAP1LP55160 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCKAP1LP55160 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCKAP1LP55160 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCKAP1LP55160 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NCKAP1LP55160 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 AP001269.4-201ENST00000609611 512 ntBASIC19.38■□□□□ 0.69
NCKAP1LP55160 REXO1L6P-202ENST00000619970 1078 ntBASIC19.38■□□□□ 0.69
NCKAP1LP55160 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.38■□□□□ 0.69
NCKAP1LP55160 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCKAP1LP55160 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCKAP1LP55160 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NCKAP1LP55160 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 PMPCAP1-201ENST00000508114 1576 ntBASIC19.37■□□□□ 0.69
NCKAP1LP55160 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCKAP1LP55160 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCKAP1LP55160 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCKAP1LP55160 AC111152.3-201ENST00000569699 673 ntBASIC19.37■□□□□ 0.69
NCKAP1LP55160 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCKAP1LP55160 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 AC138932.1-201ENST00000534164 6830 ntBASIC19.37■□□□□ 0.69
NCKAP1LP55160 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCKAP1LP55160 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCKAP1LP55160 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.37■□□□□ 0.69
NCKAP1LP55160 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 AC020763.4-201ENST00000623414 4170 ntBASIC19.36■□□□□ 0.69
NCKAP1LP55160 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 AC106795.1-205ENST00000512851 1056 ntBASIC19.36■□□□□ 0.69
NCKAP1LP55160 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
NCKAP1LP55160 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NCKAP1LP55160 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NCKAP1LP55160 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NCKAP1LP55160 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.35■□□□□ 0.69
NCKAP1LP55160 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.35■□□□□ 0.69
NCKAP1LP55160 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCKAP1LP55160 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.35■□□□□ 0.69
NCKAP1LP55160 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
NCKAP1LP55160 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.35■□□□□ 0.69
NCKAP1LP55160 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.35■□□□□ 0.69
NCKAP1LP55160 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms