Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL928711.1-201ENST00000570165 459 ntBASIC25.16■■□□□ 1.62
CLTCL1P53675 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC25.16■■□□□ 1.62
CLTCL1P53675 AC004877.2-201ENST00000623941 599 ntBASIC25.16■■□□□ 1.62
CLTCL1P53675 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CLTCL1P53675 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CLTCL1P53675 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLTCL1P53675 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLTCL1P53675 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CLTCL1P53675 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLTCL1P53675 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CLTCL1P53675 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLTCL1P53675 CYP51A1P2-201ENST00000419457 1499 ntBASIC25.16■■□□□ 1.62
CLTCL1P53675 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLTCL1P53675 CD82-202ENST00000342935 967 ntTSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 ATP6V0CP3-201ENST00000417255 467 ntBASIC25.15■■□□□ 1.62
CLTCL1P53675 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC25.15■■□□□ 1.62
CLTCL1P53675 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC25.15■■□□□ 1.62
CLTCL1P53675 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 AMT-250ENST00000637682 1823 ntTSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC25.15■■□□□ 1.62
CLTCL1P53675 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CLTCL1P53675 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 RFPL4AP1-201ENST00000530883 850 ntBASIC25.15■■□□□ 1.62
CLTCL1P53675 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLTCL1P53675 AC068137.2-201ENST00000605408 478 ntBASIC25.15■■□□□ 1.62
CLTCL1P53675 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CLTCL1P53675 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CLTCL1P53675 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC25.14■■□□□ 1.62
CLTCL1P53675 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CLTCL1P53675 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CLTCL1P53675 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CLTCL1P53675 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.14■■□□□ 1.61
CLTCL1P53675 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CLTCL1P53675 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
CLTCL1P53675 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC25.14■■□□□ 1.61
CLTCL1P53675 GGTLC5P-201ENST00000617623 998 ntBASIC25.14■■□□□ 1.61
CLTCL1P53675 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.14■■□□□ 1.61
CLTCL1P53675 CITED2-204ENST00000618718 901 ntTSL 2 BASIC25.14■■□□□ 1.61
CLTCL1P53675 AC091812.2-201ENST00000619081 385 ntBASIC25.14■■□□□ 1.61
CLTCL1P53675 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CLTCL1P53675 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC25.14■■□□□ 1.61
CLTCL1P53675 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
CLTCL1P53675 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLTCL1P53675 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC25.13■■□□□ 1.61
CLTCL1P53675 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLTCL1P53675 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLTCL1P53675 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC25.13■■□□□ 1.61
CLTCL1P53675 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC25.13■■□□□ 1.61
CLTCL1P53675 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC25.13■■□□□ 1.61
CLTCL1P53675 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CLTCL1P53675 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLTCL1P53675 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLTCL1P53675 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC25.13■■□□□ 1.61
CLTCL1P53675 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CLTCL1P53675 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CLTCL1P53675 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CLTCL1P53675 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC25.12■■□□□ 1.61
CLTCL1P53675 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
CLTCL1P53675 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.12■■□□□ 1.61
CLTCL1P53675 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC25.12■■□□□ 1.61
CLTCL1P53675 TK1-204ENST00000590430 683 ntTSL 3 BASIC25.12■■□□□ 1.61
CLTCL1P53675 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC25.12■■□□□ 1.61
CLTCL1P53675 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC25.12■■□□□ 1.61
CLTCL1P53675 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC25.12■■□□□ 1.61
CLTCL1P53675 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC25.12■■□□□ 1.61
CLTCL1P53675 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 AL135999.2-201ENST00000622438 1686 ntBASIC25.12■■□□□ 1.61
CLTCL1P53675 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC25.12■■□□□ 1.61
CLTCL1P53675 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC25.12■■□□□ 1.61
CLTCL1P53675 BCAR1-209ENST00000546196 1340 ntBASIC25.12■■□□□ 1.61
CLTCL1P53675 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLTCL1P53675 CNN2P11-201ENST00000429351 262 ntBASIC25.12■■□□□ 1.61
CLTCL1P53675 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC25.12■■□□□ 1.61
CLTCL1P53675 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC25.12■■□□□ 1.61
CLTCL1P53675 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC25.12■■□□□ 1.61
CLTCL1P53675 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CLTCL1P53675 AC096734.2-201ENST00000562054 433 ntBASIC25.12■■□□□ 1.61
CLTCL1P53675 AC009113.1-201ENST00000570267 2443 ntBASIC25.11■■□□□ 1.61
CLTCL1P53675 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms