Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2A1P52655 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2A1P52655 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
GTF2A1P52655 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.42■□□□□ 0.38
GTF2A1P52655 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.42■□□□□ 0.38
GTF2A1P52655 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2A1P52655 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2A1P52655 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
GTF2A1P52655 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2A1P52655 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2A1P52655 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2A1P52655 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2A1P52655 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GTF2A1P52655 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
GTF2A1P52655 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GTF2A1P52655 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 YBX1P1-201ENST00000445822 960 ntBASIC17.41■□□□□ 0.38
GTF2A1P52655 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.41■□□□□ 0.38
GTF2A1P52655 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 AL591742.1-201ENST00000604433 565 ntBASIC17.41■□□□□ 0.38
GTF2A1P52655 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2A1P52655 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2A1P52655 MYCNOS-205ENST00000641950 531 ntBASIC17.41■□□□□ 0.38
GTF2A1P52655 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2A1P52655 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2A1P52655 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2A1P52655 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
GTF2A1P52655 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2A1P52655 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 KRT8P20-201ENST00000423953 1409 ntBASIC17.4■□□□□ 0.38
GTF2A1P52655 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2A1P52655 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2A1P52655 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GTF2A1P52655 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2A1P52655 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GTF2A1P52655 AC016405.3-201ENST00000607710 860 ntBASIC17.4■□□□□ 0.38
GTF2A1P52655 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2A1P52655 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2A1P52655 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GTF2A1P52655 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
GTF2A1P52655 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GTF2A1P52655 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2A1P52655 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2A1P52655 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2A1P52655 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
GTF2A1P52655 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GTF2A1P52655 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
GTF2A1P52655 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.39■□□□□ 0.37
GTF2A1P52655 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.39■□□□□ 0.37
GTF2A1P52655 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GTF2A1P52655 KRT19P1-201ENST00000405746 1186 ntBASIC17.39■□□□□ 0.37
GTF2A1P52655 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.39■□□□□ 0.37
GTF2A1P52655 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 TERF1P5-201ENST00000477545 1207 ntBASIC17.39■□□□□ 0.37
GTF2A1P52655 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.39■□□□□ 0.37
GTF2A1P52655 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
GTF2A1P52655 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.39■□□□□ 0.37
GTF2A1P52655 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.39■□□□□ 0.37
GTF2A1P52655 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GTF2A1P52655 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GTF2A1P52655 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms