Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5CP51148 DUTP2-201ENST00000519164 463 ntBASIC14.28□□□□□ -0.12
RAB5CP51148 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB5CP51148 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
RAB5CP51148 DUX4L16-201ENST00000555130 1264 ntBASIC14.28□□□□□ -0.12
RAB5CP51148 AC016396.2-201ENST00000562575 1417 ntBASIC14.28□□□□□ -0.12
RAB5CP51148 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB5CP51148 AC006449.5-201ENST00000610658 2098 ntBASIC14.28□□□□□ -0.12
RAB5CP51148 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 NORAD-201ENST00000565493 5339 ntBASIC14.28□□□□□ -0.12
RAB5CP51148 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5CP51148 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB5CP51148 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5CP51148 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5CP51148 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB5CP51148 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB5CP51148 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB5CP51148 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5CP51148 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB5CP51148 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5CP51148 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5CP51148 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5CP51148 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5CP51148 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5CP51148 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
RAB5CP51148 KRT8P11-201ENST00000409686 1436 ntBASIC14.27□□□□□ -0.12
RAB5CP51148 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5CP51148 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RAB5CP51148 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RAB5CP51148 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5CP51148 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.27□□□□□ -0.13
RAB5CP51148 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5CP51148 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5CP51148 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB5CP51148 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB5CP51148 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RAB5CP51148 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5CP51148 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5CP51148 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5CP51148 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAB5CP51148 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB5CP51148 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RAB5CP51148 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RAB5CP51148 AC060834.1-201ENST00000443027 2032 ntBASIC14.27□□□□□ -0.13
RAB5CP51148 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RAB5CP51148 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5CP51148 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RAB5CP51148 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5CP51148 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB5CP51148 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB5CP51148 AC099063.4-201ENST00000641099 1602 ntBASIC14.26□□□□□ -0.13
RAB5CP51148 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB5CP51148 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB5CP51148 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5CP51148 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5CP51148 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB5CP51148 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RAB5CP51148 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5CP51148 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
RAB5CP51148 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB5CP51148 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB5CP51148 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.26□□□□□ -0.13
RAB5CP51148 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5CP51148 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB5CP51148 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5CP51148 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
RAB5CP51148 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5CP51148 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms