Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.33■□□□□ 0.68
CASP4P49662 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CASP4P49662 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.33■□□□□ 0.68
CASP4P49662 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.33■□□□□ 0.68
CASP4P49662 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.33■□□□□ 0.68
CASP4P49662 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.33■□□□□ 0.68
CASP4P49662 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.33■□□□□ 0.68
CASP4P49662 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.33■□□□□ 0.68
CASP4P49662 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CASP4P49662 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CASP4P49662 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CASP4P49662 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CASP4P49662 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CASP4P49662 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.33■□□□□ 0.68
CASP4P49662 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.32■□□□□ 0.68
CASP4P49662 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.32■□□□□ 0.68
CASP4P49662 AC233702.3-201ENST00000578656 1387 ntBASIC19.32■□□□□ 0.68
CASP4P49662 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CASP4P49662 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CASP4P49662 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CASP4P49662 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 DRAXINP1-201ENST00000437611 948 ntBASIC19.32■□□□□ 0.68
CASP4P49662 LINC00265-3P-201ENST00000447588 903 ntBASIC19.32■□□□□ 0.68
CASP4P49662 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.32■□□□□ 0.68
CASP4P49662 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.32■□□□□ 0.68
CASP4P49662 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.32■□□□□ 0.68
CASP4P49662 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.32■□□□□ 0.68
CASP4P49662 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.32■□□□□ 0.68
CASP4P49662 LINC01451-201ENST00000623792 534 ntBASIC19.32■□□□□ 0.68
CASP4P49662 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 AC106820.2-201ENST00000563775 3264 ntBASIC19.32■□□□□ 0.68
CASP4P49662 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CASP4P49662 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CASP4P49662 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASP4P49662 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CASP4P49662 ATP5G2P1-201ENST00000433580 426 ntBASIC19.31■□□□□ 0.68
CASP4P49662 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CASP4P49662 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.31■□□□□ 0.68
CASP4P49662 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASP4P49662 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CASP4P49662 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CASP4P49662 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.3■□□□□ 0.68
CASP4P49662 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CASP4P49662 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.3■□□□□ 0.68
CASP4P49662 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASP4P49662 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CASP4P49662 COX5BP2-201ENST00000392354 334 ntBASIC19.3■□□□□ 0.68
CASP4P49662 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.3■□□□□ 0.68
CASP4P49662 AC246785.2-201ENST00000432512 513 ntBASIC19.3■□□□□ 0.68
CASP4P49662 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CASP4P49662 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms