Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 FLJ38576-201ENST00000623820 2459 ntBASIC11.99□□□□□ -0.49
CXCL5P42830 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 NKILA-202ENST00000614771 2598 ntBASIC11.99□□□□□ -0.49
CXCL5P42830 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 AC097488.1-201ENST00000507834 756 ntBASIC11.99□□□□□ -0.49
CXCL5P42830 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 KRT18P6-201ENST00000555540 1265 ntBASIC11.99□□□□□ -0.49
CXCL5P42830 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 WWOX-216ENST00000569818 525 ntBASIC11.99□□□□□ -0.49
CXCL5P42830 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.99□□□□□ -0.49
CXCL5P42830 AC006058.3-201ENST00000606217 1069 ntBASIC11.99□□□□□ -0.49
CXCL5P42830 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.99□□□□□ -0.49
CXCL5P42830 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL5P42830 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
CXCL5P42830 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.98□□□□□ -0.49
CXCL5P42830 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC11.98□□□□□ -0.49
CXCL5P42830 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC11.98□□□□□ -0.49
CXCL5P42830 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CXCL5P42830 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC11.98□□□□□ -0.49
CXCL5P42830 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 MESTP1-201ENST00000404287 994 ntBASIC11.98□□□□□ -0.49
CXCL5P42830 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.98□□□□□ -0.49
CXCL5P42830 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CXCL5P42830 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CXCL5P42830 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
CXCL5P42830 AP001412.1-201ENST00000608405 714 ntBASIC11.98□□□□□ -0.49
CXCL5P42830 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CXCL5P42830 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC11.98□□□□□ -0.49
CXCL5P42830 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CXCL5P42830 AC108860.2-201ENST00000562760 2183 ntBASIC11.98□□□□□ -0.49
CXCL5P42830 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
CXCL5P42830 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CXCL5P42830 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.98□□□□□ -0.49
CXCL5P42830 AC063926.3-201ENST00000624734 5658 ntBASIC11.97□□□□□ -0.49
CXCL5P42830 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CXCL5P42830 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CXCL5P42830 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CXCL5P42830 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms