Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2BP42772 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2BP42772 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CDKN2BP42772 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2BP42772 PCDHA12-202ENST00000613593 2588 ntBASIC18.33■□□□□ 0.52
CDKN2BP42772 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2BP42772 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDKN2BP42772 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 AL645929.1-201ENST00000420084 975 ntBASIC18.32■□□□□ 0.52
CDKN2BP42772 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2BP42772 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.32■□□□□ 0.52
CDKN2BP42772 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKN2BP42772 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDKN2BP42772 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2BP42772 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2BP42772 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2BP42772 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKN2BP42772 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CDKN2BP42772 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKN2BP42772 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDKN2BP42772 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2BP42772 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2BP42772 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CDKN2BP42772 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDKN2BP42772 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.31■□□□□ 0.52
CDKN2BP42772 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2BP42772 RN7SL606P-201ENST00000472779 293 ntBASIC18.31■□□□□ 0.52
CDKN2BP42772 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDKN2BP42772 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDKN2BP42772 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKN2BP42772 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 AC022211.2-201ENST00000585075 2527 ntBASIC18.31■□□□□ 0.52
CDKN2BP42772 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDKN2BP42772 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 AC009053.2-201ENST00000563701 2365 ntBASIC18.31■□□□□ 0.52
CDKN2BP42772 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2BP42772 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDKN2BP42772 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKN2BP42772 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDKN2BP42772 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKN2BP42772 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKN2BP42772 TMPOP1-202ENST00000424642 1267 ntBASIC18.3■□□□□ 0.52
CDKN2BP42772 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.3■□□□□ 0.52
CDKN2BP42772 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKN2BP42772 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKN2BP42772 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKN2BP42772 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDKN2BP42772 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKN2BP42772 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDKN2BP42772 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2BP42772 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKN2BP42772 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2BP42772 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2BP42772 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms