Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATP6V1AP38606 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATP6V1AP38606 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATP6V1AP38606 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATP6V1AP38606 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATP6V1AP38606 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.46■■□□□ 1.19
ATP6V1AP38606 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATP6V1AP38606 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.46■■□□□ 1.19
ATP6V1AP38606 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.46■■□□□ 1.19
ATP6V1AP38606 AC009336.1-201ENST00000608941 1553 ntBASIC22.46■■□□□ 1.19
ATP6V1AP38606 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.46■■□□□ 1.19
ATP6V1AP38606 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATP6V1AP38606 AC073592.3-201ENST00000625118 1834 ntBASIC22.45■■□□□ 1.19
ATP6V1AP38606 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 AL035633.1-201ENST00000406139 838 ntBASIC22.45■■□□□ 1.18
ATP6V1AP38606 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 AC004449.1-201ENST00000564240 433 ntBASIC22.45■■□□□ 1.18
ATP6V1AP38606 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
ATP6V1AP38606 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V1AP38606 AC100803.2-201ENST00000562459 1963 ntBASIC22.45■■□□□ 1.18
ATP6V1AP38606 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 IGHV3-52-201ENST00000519770 353 ntBASIC22.44■■□□□ 1.18
ATP6V1AP38606 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 AC004835.2-201ENST00000603762 682 ntBASIC22.44■■□□□ 1.18
ATP6V1AP38606 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.44■■□□□ 1.18
ATP6V1AP38606 AL513210.1-201ENST00000629608 234 ntBASIC22.44■■□□□ 1.18
ATP6V1AP38606 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.44■■□□□ 1.18
ATP6V1AP38606 AC092902.6-201ENST00000641783 218 ntBASIC22.44■■□□□ 1.18
ATP6V1AP38606 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V1AP38606 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
ATP6V1AP38606 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
ATP6V1AP38606 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP6V1AP38606 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP6V1AP38606 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
ATP6V1AP38606 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP6V1AP38606 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP6V1AP38606 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 AC004461.1-201ENST00000412461 403 ntBASIC22.43■■□□□ 1.18
ATP6V1AP38606 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 AC093512.1-201ENST00000617969 520 ntBASIC22.43■■□□□ 1.18
ATP6V1AP38606 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP6V1AP38606 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V1AP38606 BX276092.7-203ENST00000637198 1536 ntBASIC22.42■■□□□ 1.18
ATP6V1AP38606 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms