Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 COX5BP2-201ENST00000392354 334 ntBASIC16.34■□□□□ 0.21
ABCD3P28288 FAM220CP-201ENST00000395253 831 ntBASIC16.34■□□□□ 0.21
ABCD3P28288 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ABCD3P28288 TSPY19P-201ENST00000418461 509 ntBASIC16.34■□□□□ 0.21
ABCD3P28288 DUSP5P1-201ENST00000441325 1139 ntBASIC16.34■□□□□ 0.21
ABCD3P28288 TSPY18P-201ENST00000441642 509 ntBASIC16.34■□□□□ 0.21
ABCD3P28288 KRT16P4-201ENST00000453883 522 ntBASIC16.34■□□□□ 0.21
ABCD3P28288 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.34■□□□□ 0.21
ABCD3P28288 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.34■□□□□ 0.21
ABCD3P28288 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.34■□□□□ 0.21
ABCD3P28288 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 NOC2LP2-201ENST00000407594 1944 ntBASIC16.34■□□□□ 0.21
ABCD3P28288 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.34■□□□□ 0.21
ABCD3P28288 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.34■□□□□ 0.21
ABCD3P28288 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ABCD3P28288 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
ABCD3P28288 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCD3P28288 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.34■□□□□ 0.21
ABCD3P28288 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ABCD3P28288 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ABCD3P28288 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ABCD3P28288 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.33■□□□□ 0.21
ABCD3P28288 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ABCD3P28288 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ABCD3P28288 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ABCD3P28288 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ABCD3P28288 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
ABCD3P28288 INTS4P1-201ENST00000438455 1935 ntBASIC16.33■□□□□ 0.21
ABCD3P28288 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ABCD3P28288 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ABCD3P28288 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.33■□□□□ 0.2
ABCD3P28288 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.33■□□□□ 0.2
ABCD3P28288 KRT18P31-201ENST00000506277 1292 ntBASIC16.33■□□□□ 0.2
ABCD3P28288 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.33■□□□□ 0.2
ABCD3P28288 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.33■□□□□ 0.2
ABCD3P28288 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.33■□□□□ 0.2
ABCD3P28288 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.33■□□□□ 0.2
ABCD3P28288 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.33■□□□□ 0.2
ABCD3P28288 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.33■□□□□ 0.2
ABCD3P28288 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.33■□□□□ 0.2
ABCD3P28288 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ABCD3P28288 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.33■□□□□ 0.2
ABCD3P28288 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.33■□□□□ 0.2
ABCD3P28288 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ABCD3P28288 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ABCD3P28288 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.33■□□□□ 0.2
ABCD3P28288 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ABCD3P28288 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.33■□□□□ 0.2
ABCD3P28288 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ABCD3P28288 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ABCD3P28288 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ABCD3P28288 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.32■□□□□ 0.2
ABCD3P28288 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.32■□□□□ 0.2
ABCD3P28288 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.32■□□□□ 0.2
ABCD3P28288 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ABCD3P28288 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.32■□□□□ 0.2
ABCD3P28288 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.32■□□□□ 0.2
ABCD3P28288 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.32■□□□□ 0.2
ABCD3P28288 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ABCD3P28288 AC122714.2-201ENST00000502787 707 ntBASIC16.32■□□□□ 0.2
ABCD3P28288 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.32■□□□□ 0.2
ABCD3P28288 AC091304.2-201ENST00000564639 760 ntBASIC16.32■□□□□ 0.2
ABCD3P28288 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.32■□□□□ 0.2
ABCD3P28288 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.32■□□□□ 0.2
ABCD3P28288 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ABCD3P28288 MIR5100-201ENST00000579544 119 ntBASIC16.32■□□□□ 0.2
ABCD3P28288 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.32■□□□□ 0.2
ABCD3P28288 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.32■□□□□ 0.2
ABCD3P28288 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms