Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.7■□□□□ 0.1
MSR1P21757 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MSR1P21757 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MSR1P21757 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.7■□□□□ 0.1
MSR1P21757 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.7■□□□□ 0.1
MSR1P21757 AL136038.3-201ENST00000561909 1096 ntBASIC15.7■□□□□ 0.1
MSR1P21757 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MSR1P21757 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MSR1P21757 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.7■□□□□ 0.1
MSR1P21757 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.7■□□□□ 0.1
MSR1P21757 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSR1P21757 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MSR1P21757 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
MSR1P21757 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MSR1P21757 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 AC068472.1-201ENST00000474589 881 ntBASIC15.69■□□□□ 0.1
MSR1P21757 GUSBP12-201ENST00000513727 720 ntBASIC15.69■□□□□ 0.1
MSR1P21757 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.69■□□□□ 0.1
MSR1P21757 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.69■□□□□ 0.1
MSR1P21757 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
MSR1P21757 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.69■□□□□ 0.1
MSR1P21757 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.69■□□□□ 0.1
MSR1P21757 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
MSR1P21757 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MSR1P21757 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.69■□□□□ 0.1
MSR1P21757 AL355312.1-201ENST00000407115 2176 ntBASIC15.69■□□□□ 0.1
MSR1P21757 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.69■□□□□ 0.1
MSR1P21757 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MSR1P21757 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSR1P21757 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.68■□□□□ 0.1
MSR1P21757 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.68■□□□□ 0.1
MSR1P21757 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.68■□□□□ 0.1
MSR1P21757 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.68■□□□□ 0.1
MSR1P21757 TSPY22P-201ENST00000427496 604 ntBASIC15.68■□□□□ 0.1
MSR1P21757 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.68■□□□□ 0.1
MSR1P21757 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MSR1P21757 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.68■□□□□ 0.1
MSR1P21757 AL121956.5-201ENST00000625261 221 ntBASIC15.68■□□□□ 0.1
MSR1P21757 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MSR1P21757 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSR1P21757 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
MSR1P21757 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
MSR1P21757 AC133963.1-201ENST00000504166 1679 ntBASIC15.67■□□□□ 0.1
MSR1P21757 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.67■□□□□ 0.1
MSR1P21757 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
MSR1P21757 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.67■□□□□ 0.1
MSR1P21757 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSR1P21757 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms