Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CHRM3P20309 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRM3P20309 SPDYE13P-201ENST00000445314 798 ntBASIC17.69■□□□□ 0.42
CHRM3P20309 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRM3P20309 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRM3P20309 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRM3P20309 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRM3P20309 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHRM3P20309 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHRM3P20309 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 AL645929.1-201ENST00000420084 975 ntBASIC17.68■□□□□ 0.42
CHRM3P20309 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRM3P20309 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRM3P20309 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRM3P20309 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRM3P20309 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRM3P20309 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHRM3P20309 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHRM3P20309 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRM3P20309 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHRM3P20309 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRM3P20309 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRM3P20309 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRM3P20309 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 AC112698.1-201ENST00000510299 916 ntBASIC17.67■□□□□ 0.42
CHRM3P20309 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.67■□□□□ 0.42
CHRM3P20309 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.67■□□□□ 0.42
CHRM3P20309 AL390719.2-201ENST00000606993 987 ntBASIC17.67■□□□□ 0.42
CHRM3P20309 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.67■□□□□ 0.42
CHRM3P20309 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.67■□□□□ 0.42
CHRM3P20309 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CHRM3P20309 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHRM3P20309 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRM3P20309 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRM3P20309 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 OR6D1P-203ENST00000641209 4860 ntBASIC17.67■□□□□ 0.42
CHRM3P20309 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRM3P20309 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CHRM3P20309 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRM3P20309 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRM3P20309 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 AC009949.1-201ENST00000623048 1830 ntBASIC17.66■□□□□ 0.42
CHRM3P20309 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRM3P20309 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRM3P20309 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRM3P20309 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRM3P20309 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRM3P20309 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRM3P20309 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.66■□□□□ 0.42
CHRM3P20309 NTF6B-201ENST00000591913 560 ntBASIC17.66■□□□□ 0.42
CHRM3P20309 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRM3P20309 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHRM3P20309 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHRM3P20309 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHRM3P20309 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRM3P20309 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRM3P20309 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRM3P20309 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRM3P20309 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRM3P20309 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRM3P20309 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRM3P20309 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CHRM3P20309 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms